Help Center

Find answers to common questions and learn how to use PRGmminer effectively

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Quick Start Guide

Welcome to PRGminer! This guide will walk you through submitting sequences for analysis, understanding prediction options, and interpreting results.

New to PRGminer? Explore our step-by-step tutorial with visual guides and explanations.

Getting Started

  1. Go to the Prediction page.
  2. Select an input method:
    • Upload a FASTA file
    • Paste sequences directly
    • Enter sequence identifiers
  3. Choose your analysis phase:
    • Phase 1: R-gene detection (binary classification)
    • Phase 2: R-gene family classification
  4. Submit sequences for analysis.
  5. Review detailed predictions and confidence scores.
  6. Download results in multiple formats for further analysis.

Input Requirements

  • Sequences must be in FASTA format
  • Each sequence must have a unique identifier
  • Maximum file size: 10MB
  • Supported file extensions: .fasta, .fa, .txt

Additional Resources

Explore additional materials to help you get the most out of PRGminer.

Standalone Version

Access the standalone version of PRGminer for large-scale sequence analysis.

Tutorial

Step-by-step guides and tutorials to help you use PRGminer effectively.

Publications

Scientific papers and citations related to PRGminer.

GitHub Repository

Access the source code, contribute to development, or report issues