deepNEC 2.0 Download

Download the Standalone Version

The standalone version of deepNEC 2.0 can be downloaded from the link below:

Installation Instructions

1. Download the Miniconda Installer for Linux:
Miniconda Installer for Linux
2. Extract the Archive:

tar -xvzf deepnec-2.0.tar.gz

3. Navigate to the Directory:

cd deepnec-2.0

4. Create and Activate a Conda Environment:

conda env create -f environment.yml

conda activate deepNEC

5. Install the Package:

pip install .

Usage Instructions

To run the deepNEC tool with the example FASTA file, use the following command:

deepnec -i ./example/test.fasta -od output